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Eplet/Epitope analysis of Anti-HLA antibodies can be Used

Limited epitope number of Ab reactivity was not observed in 2 sera, and one serum showed uncertain eplet pattern. Representative eplet specific Ab analysis in a single serum is shown in the Table 1. The largest MFI values of C1q negative Ab were used for subsequent statistical analysis. In the representative serum this value was 231.

https://www.sciencedirect.com/science/article/pii/S0198885915002736

HLAMatchmaker

HLAMatchmaker. HLAMatchmaker is a structurally based computer algorithm to determine HLA matching at the epitope level. It focuses on epitopes recognized by HLA antibodies and the determination of epitope-based mismatch acceptability for sensitized patients considered for organ transplantation or in need of compatible platelet transfusions.

http://www.epitopes.net/

Novel aspects of epitope matching and practical

Figure 2. Three-dimensional structure of a class II human leukocyte antigen (HLA) molecule (light gray denotes α subunit and dark gray denotes β subunit) showing immunogenic epitopes (triplet vs. eplet) and the theoretical concepts of nonself/self paradigm and physicochemical properties of importance in epitope recognition.

https://www.kidney-international.org/article/S0085-2538(17)30604-X/fulltext

Update of the HLA class I eplet database in the website

a potential epitope. Therefore, the 76ANT patch was chosen as the annotated eplet and it is defined by residues in the 73T+76A+77N+79G+80T combination. Certain alleles share multiple configurations that correspond to two or more eplets in different sequence positions but which cannot be distinguished from each other because there are

http://www.epitopes.net/pdfs/rene/U41_new_ABC_eplet_design_TA_June_2014.pdf

Reflections on HLA Epitope-Based Matching for Transplantation

One would expect the clinical relevance of epitope-based matching to apply only to epitopes that have been experimentally verified with informative antibodies. The HLA Epitope Registry has a list of antibody-verified epitopes recorded this far for each locus, but the repertoire is still incomplete.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5124729/

HLA Epitopes as Viewed by Antibodies: What Is it All About

To account for that, the concept of HLA epitope was extended to a structural epitope rather than the mere eplet differences between certain HLA sequences, leading to a nonself/self paradigm, requiring identity between most of the 15–25 surface amino acid residues that constitute the functional epitope, except for the implicated eplet. The

https://www.onlinelibrary.wiley.com/doi/full/10.1111/ajt.13192

HLA EPLETS IN TRANPLANTATION - cdn.ymaws.com

(NO epitope mismatch) WHAT IS “RISK” IN. EPLET MISMATCHING ? LET’S ASK THE LITERATURE. LET’S ASK THE LITERATURE. 2787 KIDNEY TRANSPLANTS FROM 1995-2015. LET’S ASK THE LITERATURE. LET’S ASK THE LITERATURE. LET’S ASK THE LITERATURE. LET’S ASK THE LITERATURE. The current interest of the transplant community is to withdraw or minimize

https://cdn.ymaws.com/www.ashi-hla.org/resource/resmgr/tech_salary_survey/4-epitope_analysis_-2019_ash.pdf

HLA-Epitope Matching or Eplet Risk Stratification: The

This short overview is meant to emphasize the differences between the terms epitope matching and eplet mismatching (or mismatch load) as well as to provide perspective on different approaches for

https://www.researchgate.net/publication/327351196_HLA-Epitope_Matching_or_Eplet_Risk_Stratification_The_Devil_Is_in_the_Details

The Humoral Theory of Transplantation: Epitope Analysis

Journal of Immunology Research is a peer-reviewed, Open Access journal that provides a platform for scientists and clinicians working in different areas of immunology and therapy. At the center of an epitope is a polymorphic region of 1 to several AAs within a 3 Å radius, termed an eplet or alternatively the functional epitope. These

https://www.hindawi.com/journals/jir/2016/5197396/

HLAMatchmaker: A Molecularly Based Algorithm for

This report describes the design of the eplet version of HLAMatchmaker to determine class II compatibility at the structural level. This matching algorithm is based on the hypothesis, developed from molecular modeling of crystallized antigen-antibody complexes, that functional epitopes are represented by patches of surface-exposed nonself-amino acid residues surrounded by residues within a 3

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2527859/

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